Webthe average salary for a clinical supervisor is $67,051 in 2024. Visit payscale to research clinical supervisor salaries by city, experience, skill, employer and more. Webon average, clinical supervisors in the united states earn a median annual salary of around $77,256, according to indeed. However, those working in larger. Webthese charts show the average base salary (core compensation), as well as the average total cash compensation for the job of clinical supervisor in the united states.